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Outline

Our goal is to develop original RIKEN data processing technology and multidimensional measurement technology in order to contribute to understanding biological phenomena. We are especially contributing to the fields of mathematical biology, bio-medical simulations as well as medical diagnostic and treatment technology by researching and developing new data and image processing technologies and establishing new tools for quantification of biological phenomena, intended for researchers both inside and outside RIKEN.

Fields

Engineering, Informatics

Keywords

Multi dimensional image processing, Multi dimensional imaging, Bioengineering, Image analysis, Medical engineering

Subjects

1. Algorithms and computational methods for image processing, pattern recognition, computer graphics, and computer aided design
2. Software and hardware systems for biology and material science
3. Imaging devices for life science

Selected Publications

1. Morita, M., Shimokawa, K., Nishimura, M., Nakamura, S., Tsujimura, Y., Takemoto, S., Tawara, T., Yokota, H., Wemler, S.,　Miyamoto, D., Ikeno, H., Sato, A., Furuichi, T., Kobayashi, N., Okumura, Y., Yamaguchi, Y., Okamura-Oho, Y.: “ViBrism DB: an　interactive search and viewer platform for 2D/3D anatomical images of gene expression and co-expression networks”, Nucleic Acids Research, gky951 (2018).
2. Togashi, R., Tanaka, H., Nakamura, S., Yokota, H., Tange, K., Nakai, Y., Yoshioka, H., Hatarhima, H., Akita, H.: “A hepatic pDNA delivery system based on an intracellular environment sensitive vitamin E-scaffold lipid-like material with the aid of an anti-inflammatory drug”, Journal of Controlled Release, Vol. 279(10): 262-270 (2018).
3. An, G., Omodaka, K., Tsuda, S., Shiga, Y., Takada, N., Kikawa, T., Nakazawa, T., Yokota, H., Akiba, M.: “Comparison of Machine-Learning Classification Models for Glaucoma Management”, Journal of Healthcare Engineering, Vol. 2018, Article ID 6874765 (2018).
4. Sakane, A., Yoshizawa, S., Yokota, H., Sasaki, T.: “Dancing Styles of Collective Cell Migration: Image-Based Computational Analysis of JRAB/MICAL-L2”, Frontiers in Cell and Developmental Biology, Vol. 6, Article 4: 1-7 (2018).
5. Miyagawa, S., Yoshizawa, S., Yokota, H.: “Trimmed Median PCA for Robust Plane Fitting”, Proceedings of IEEE International Conference on Image Processing, pp. 753-757 (2018).

Members

Seeking a Postdoctoral Researcher or Research Scientist (W19096)

Attosecond Science Research Team

Seeking a Postdoctoral Researcher or Research Scientist (W19094)

Attosecond Science Research Team

Seeking a Postdoctoral Researcher or Research Scientist (W19093)

Attosecond Science Research Team